STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKS3Ankyrin repeat and sterile alpha motif domain containing 3. (657 aa)    
Predicted Functional Partners:
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
  
 
 
0.987
NEK7
NIMA related kinase 7; Belongs to the protein kinase superfamily.
    
 
 0.879
E4F1
E4F transcription factor 1.
   
   0.769
LRRC45
Leucine rich repeat containing 45.
   
    0.751
NEK8
NIMA related kinase 8.
    
 
 0.715
NEK6
NIMA related kinase 6; Belongs to the protein kinase superfamily.
    
 
 0.700
IFT81
Intraflagellar transport 81.
    
 0.668
WDR90
WD repeat domain 90.
    
 0.666
NPHP1
Nephrocystin 1.
    
 0.639
IFT88
Intraflagellar transport 88.
   
 0.637
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.