STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAX1BP1Tax1 binding protein 1. (806 aa)    
Predicted Functional Partners:
TNFAIP3
TNF alpha induced protein 3.
    
 0.982
Phf23
Uncharacterized protein.
   
 0.963
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.959
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1; Ubiquitin-like modifier that increases cell-surface expression of kappa-type opioid receptor through facilitating anterograde intracellular trafficking of the receptor. Involved in formation of autophagosomal vacuoles. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity); Belongs to the ATG8 family.
   
 0.953
AZI2
5-azacytidine induced 2.
    
 
 0.935
TBK1
TANK binding kinase 1.
    
 0.877
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.864
RNF11
Ring finger protein 11.
   
 
 0.832
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.820
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.793
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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