STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAISuppressor of cancer cell invasion. (578 aa)    
Predicted Functional Partners:
SERPINA5
Serpin family A member 5; Belongs to the serpin family.
      
 0.710
COL4A2
Collagen type IV alpha 2 chain.
      
 0.654
BRCA2
BRCA2 DNA repair associated.
      
 0.652
Brca1
Uncharacterized protein.
    
 
 0.627
Mrpl23
Uncharacterized protein.
      
 0.565
ZNF354C
Zinc finger protein 354C.
      
 0.555
EEF1AKMT2
EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.552
TLE3
TLE family member 3, transcriptional corepressor.
      
 0.552
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
   
 
  0.498
AHDC1
AT-hook DNA binding motif containing 1.
    
 
 0.487
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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