STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSC22D2TSC22 domain family member 2. (790 aa)    
Predicted Functional Partners:
TSC22D1
TSC22 domain family member 1.
   
 
 0.987
NRBP1
Nuclear receptor binding protein 1.
    
 
 0.982
TSC22D3
TSC22 domain family member 3.
   
 
 0.975
TSC22D4
TSC22 domain family member 4.
   
 
 0.972
C1QL3
Complement C1q like 3.
    
   0.691
C1QL1
Complement C1q like 1.
    
   0.691
FAM117A
Family with sequence similarity 117 member A.
    
 
 0.666
GLCCI1
Glucocorticoid induced 1.
    
 
 0.661
STAC2
SH3 and cysteine rich domain 2.
    
 
 0.654
ZC3H4
Zinc finger CCCH-type containing 4.
      
 0.604
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.