STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE2Synapse defective Rho GTPase homolog 2. (1196 aa)    
Predicted Functional Partners:
RASL11B
RAS like family 11 member B.
    
 0.920
RHOG
Ras homolog family member G.
    
 0.840
GEN1
GEN1 Holliday junction 5' flap endonuclease.
      
 0.764
GCM1
Glial cells missing transcription factor 1.
      
 0.760
RHOA
Ras homolog family member A.
    
 0.750
NLGN2
Neuroligin 2.
      
 0.744
CRK
CRK proto-oncogene, adaptor protein.
      
 0.737
RHOF
Ras homolog family member F, filopodia associated.
    
 0.737
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.726
RHOC
Ras homolog family member C.
    
 0.714
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.