Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGBL1ATP/GTP binding protein like 1. (1077 aa)    
Predicted Functional Partners:
KANK4
KN motif and ankyrin repeat domains 4.
    
 
 0.780
TTLL4
Tubulin tyrosine ligase like 4.
    
 
 0.737
CCDC87
Coiled-coil domain containing 87.
      
 0.669
LOXHD1
Lipoxygenase homology domains 1.
     
 0.662
KHNYN
KH and NYN domain containing.
      
 0.652
EXOC6B
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.620
SLC4A11
Solute carrier family 4 member 11.
      
 0.605
COL8A2
Collagen type VIII alpha 2 chain.
      
 0.595
RTN4R
Reticulon 4 receptor.
     
 0.511
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
   0.506
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.