STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOTMyotilin. (484 aa)    
Predicted Functional Partners:
MYOZ1
Myozenin 1.
   
  
 0.814
CCDC25
Coiled-coil domain containing 25.
    
 0.792
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
 0.785
PKDREJ
Polycystin family receptor for egg jelly.
    
 0.785
FLNC
Filamin C.
    
 
 0.785
BAG3
BCL2 associated athanogene 3.
    
 
 0.730
NEB
Nebulin.
   
  
 0.730
ACTN2
Actinin alpha 2.
   
 
 0.703
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 
 0.685
EXOC5
Exocyst complex component 5.
     
 0.674
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.