STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9AVL9 cell migration associated. (620 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.588
RAB30
RAB30, member RAS oncogene family.
      
 0.571
RAB33B
RAB33B, member RAS oncogene family.
      
 0.559
DENND10
DENN domain containing 10.
      
 0.557
DENND11
DENN domain containing 11.
      
 0.557
RAB33A
RAB33A, member RAS oncogene family.
      
 0.555
DENND6A
DENN domain containing 6A.
      
 0.554
RAB18
RAB18, member RAS oncogene family.
      
 0.493
DENND4B
DENN domain containing 4B.
      
 0.478
DENND2A
DENN domain containing 2A.
      
 0.440
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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