STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSCAN29Zinc finger and SCAN domain containing 29. (853 aa)    
Predicted Functional Partners:
Pgbd1
DDE_Tnp_1_7 domain-containing protein.
  
 
   0.727
SCAND1
SCAN domain containing 1.
    
  
0.658
ZNF213
Zinc finger protein 213.
    
  
0.656
ZNF446
Zinc finger protein 446.
    
  
0.656
ZNF394
Zinc finger protein 394.
    
  
0.653
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.635
ZSCAN20
Zinc finger and SCAN domain containing 20.
  
 
  
0.629
ZSCAN21
Zinc finger and SCAN domain containing 21.
   
  
0.622
ZNF174
Zinc finger protein 174.
   
  
0.610
KCTD6
Potassium channel tetramerization domain containing 6.
    
 0.609
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.