STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFF4AF4/FMR2 family member 4. (1112 aa)    
Predicted Functional Partners:
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.999
ELL2
Elongation factor for RNA polymerase II 2.
   
 0.998
ELL
Elongation factor for RNA polymerase II.
   
 0.989
Cdk9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.986
ELL3
Elongation factor for RNA polymerase II 3.
   
 0.982
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.981
MLLT1
MLLT1 super elongation complex subunit.
    
 0.978
H0VDT0_CAVPO
Protein kinase domain-containing protein.
    
 0.978
EAF2
ELL associated factor 2.
    
 0.966
ENSCPOP00000028778
AHD domain-containing protein.
    
 0.955
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.