STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENDOD1Endonuclease domain containing 1. (457 aa)    
Predicted Functional Partners:
TMEM43
Transmembrane protein 43.
    
 
 0.933
TMCO2
Transmembrane and coiled-coil domains 2.
      
 0.811
MSL3
MSL complex subunit 3.
    
 0.726
MSL2
MSL complex subunit 2.
    
 0.720
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
      
 0.683
TM2D1
TM2 domain containing 1.
      
 0.679
RNF26
Ring finger protein 26.
  
 
 
 0.673
TMED1
Transmembrane p24 trafficking protein 1.
      
 0.650
TPPP2
Tubulin polymerization promoting protein family member 2.
      
 0.643
C2CD2
C2 calcium dependent domain containing 2.
      
 0.632
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.