STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFTumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...] (233 aa)    
Predicted Functional Partners:
TNFRSF1B
TNF receptor superfamily member 1B.
   
 0.999
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.999
NFKB1
Nuclear factor kappa B subunit 1.
   
 0.998
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.998
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.998
ADAM17
ADAM metallopeptidase domain 17.
    
 0.997
TNFAIP3
TNF alpha induced protein 3.
   
 0.994
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.993
TRADD
TNFRSF1A associated via death domain.
    
 0.993
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.993
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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