STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H0UYD0_CAVPOCalpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (727 aa)    
Predicted Functional Partners:
CYGB
Cytoglobin; Belongs to the globin family.
   
 
 0.897
IQCA1
IQ motif containing with AAA domain 1.
   
 
 0.893
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
   
 
 0.891
CCDC149
Coiled-coil domain containing 149.
      
 0.884
SLC36A1
Solute carrier family 36 member 1.
      
 0.875
NGB
Neuroglobin; Belongs to the globin family.
   
 
 0.774
ENSCPOP00000022553
Protein kinase domain-containing protein.
      
 0.769
HEG1
Heart development protein with EGF like domains 1.
    
 0.684
PCDH15
Protocadherin related 15.
      
 0.648
SAMD5
Sterile alpha motif domain containing 5.
      
 0.645
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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