STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Znf142Uncharacterized protein. (1834 aa)    
Predicted Functional Partners:
MRPS16
Mitochondrial ribosomal protein S16.
   
 0.622
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.583
STK36
Serine/threonine kinase 36.
    
 0.569
BARD1
BRCA1 associated RING domain 1.
    
  0.506
SLC38A11
Solute carrier family 38 member 11.
    
 0.472
AMBRA1
Autophagy and beclin 1 regulator 1.
   
  0.472
H0V4I5_CAVPO
Uncharacterized protein.
    
 
 0.467
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.466
NME8
NME/NM23 family member 8.
    
 0.466
YTHDC2
YTH domain containing 2.
    
  0.451
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.