STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTTNRotatin. (2205 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2.
   
 
 0.813
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.806
PTGES3L
Prostaglandin E synthase 3 like.
     
 0.800
STIL
STIL centriolar assembly protein.
    
 
 0.792
PCNT
Pericentrin.
      
 0.666
CD226
CD226 molecule.
 
   
 0.646
TH
Tyrosine hydroxylase.
     
 0.639
GOT1
Aspartate aminotransferase.
    
 0.630
POC5
POC5 centriolar protein.
      
 0.611
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
    
 0.608
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.