STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEXNNexilin F-actin binding protein. (674 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2.
 
  
  0.708
MIGA1
Mitoguardin 1.
 
      0.688
SURF6
Surfeit 6.
     
 0.627
PPP1R9A
Protein phosphatase 1 regulatory subunit 9A.
    
 
 0.600
PPP1R9B
Protein phosphatase 1 regulatory subunit 9B.
    
 
 0.554
DPM3
Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.
     
 0.496
Hsh2d
SH2 domain-containing protein.
      
 0.495
DOLK
Dolichol kinase.
     
 0.494
SAMD9L
Sterile alpha motif domain containing 9 like.
      
 0.469
CMPK2
Cytidine/uridine monophosphate kinase 2.
      
 0.460
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.