STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100716469Ig-like domain-containing protein. (259 aa)    
Predicted Functional Partners:
HLA-DMA
Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family.
 
 
 0.999
HLA-DRA
Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.
   
0.998
HLA-DOA
Major histocompatibility complex, class II, DO alpha; Belongs to the MHC class II family.
   
0.995
LOC100713671
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.994
LOC100715615
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.993
CD74
CD74 molecule.
   
 0.986
HLA-DOB
Major histocompatibility complex, class II, DO beta.
   
0.986
LOC100714501
Ig-like domain-containing protein.
   
0.967
LOC100714780
Ig-like domain-containing protein.
   
0.967
HLA-DQB1
Ig-like domain-containing protein.
   
0.950
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.