STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOZ1Myozenin 1. (298 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
   
 
 0.973
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 
 0.949
TNNC2
Troponin C2, fast skeletal type.
   
  
 0.887
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
  
 0.867
FLNC
Filamin C.
    
 
 0.816
MYOT
Myotilin.
   
  
 0.814
Sln
Uncharacterized protein.
   
  
 0.803
TNNI2
Troponin I2, fast skeletal type.
   
  
 0.793
AMPD1
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
  
 0.781
TNNT3
Troponin T3, fast skeletal type.
   
  
 0.777
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.