STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC52A3Solute carrier family 52 member 3. (463 aa)    
Predicted Functional Partners:
SLC17A8
Solute carrier family 17 member 8.
      
 0.568
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.555
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.553
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
      
 0.551
PCDH15
Protocadherin related 15.
      
 0.523
TMC1
Transmembrane channel-like protein.
      
 0.451
PLCE1
Phosphoinositide phospholipase C.
      
 0.438
CLIC5
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.437
ENSCPOP00000030667
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.437
USH2A
Usherin.
      
 0.434
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.