STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC23Tetratricopeptide repeat domain 23. (468 aa)    
Predicted Functional Partners:
Iqce
Uncharacterized protein.
    
 
 0.702
EFCAB7
EF-hand calcium binding domain 7.
    
 
 0.569
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.515
TXNDC15
Thioredoxin domain containing 15.
      
 0.499
PGPEP1L
Pyroglutamyl-peptidase I like.
      
 0.448
INTS10
Integrator complex subunit 10.
      
 0.435
FAM92A
Family with sequence similarity 92 member A.
      
 0.408
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.