STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yif1aUncharacterized protein. (140 aa)    
Predicted Functional Partners:
RABAC1
PRA1 family protein.
   
 
 0.789
YIPF4
Protein YIPF.
    
 
 0.767
YIPF7
Protein YIPF.
    
 
 0.766
YIPF5
Protein YIPF.
    
 
 0.766
SELENOS
Selenoprotein S.
    
 
 0.755
MAEA
Macrophage erythroblast attacher.
   
 
 0.675
RAB1A
RAB1A, member RAS oncogene family.
   
 
 0.589
RAB1B
RAB1B, member RAS oncogene family.
   
 
 0.545
VAPA
VAMP associated protein A.
    
 
 0.525
Ier3ip1
Immediate early response 3 interacting protein 1.
    
 
 0.518
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.