STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAPRE3Microtubule associated protein RP/EB family member 3. (281 aa)    
Predicted Functional Partners:
MAPRE2
Microtubule associated protein RP/EB family member 2.
   
   0.963
GAS2L1
Growth arrest specific 2 like 1.
    
 
 0.959
Dctn1
CAP-Gly domain-containing protein.
    
 0.953
CLIP1
CAP-Gly domain containing linker protein 1.
    
 0.938
H0VEL3_CAVPO
EB1 C-terminal domain-containing protein.
    
   0.926
Mapre1
Uncharacterized protein.
    
   0.926
ENSCPOP00000022293
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.924
CKAP5
Cytoskeleton associated protein 5.
   
 0.912
TUBA4A
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.903
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.902
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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