STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM214Transmembrane protein 214. (694 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.682
TMEM184A
Transmembrane protein 184A.
      
 0.603
CKAP4
Cytoskeleton associated protein 4.
    
 
 0.586
SEC61A2
SEC61 translocon alpha 2 subunit.
   
  
 0.564
SEC61A1
SEC61 translocon alpha 1 subunit.
   
  
 0.564
TMEM70
Transmembrane protein 70.
      
 0.563
RHBDD1
Rhomboid domain containing 1.
      
 0.556
POPDC2
Popeye domain containing 2.
      
 0.556
KLHL31
Kelch like family member 31.
      
 0.555
TRMT11
tRNA methyltransferase 11 homolog.
      
 0.555
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.