STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRGNSerglycin. (167 aa)    
Predicted Functional Partners:
PRF1
Perforin 1.
    
 
 0.629
CD44
CD44 molecule (Indian blood group).
   
  
 0.579
H0VBL5_CAVPO
Uncharacterized protein.
    
 
 0.547
CPA3
Carboxypeptidase A3.
      
 0.469
CMA1
Chymase; Major secreted protease of mast cells with suspected roles in vasoactive peptide generation, extracellular matrix degradation, and regulation of gland secretion.
    
 
 0.437
Ndst2
Uncharacterized protein.
      
 0.427
ANKH
ANKH inorganic pyrophosphate transport regulator.
      
 0.412
CDC37L1
Cell division cycle 37 like 1.
      
 0.405
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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