Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHD3 | Chd4 | ENSCPOP00000016647 | ENSCPOP00000007645 | Chromodomain helicase DNA binding protein 3. | Uncharacterized protein. | 0.951 |
CHD3 | GATAD2A | ENSCPOP00000016647 | ENSCPOP00000029598 | Chromodomain helicase DNA binding protein 3. | GATA zinc finger domain containing 2A. | 0.984 |
CHD3 | GATAD2B | ENSCPOP00000016647 | ENSCPOP00000009273 | Chromodomain helicase DNA binding protein 3. | GATA zinc finger domain containing 2B. | 0.968 |
CHD3 | HDAC1 | ENSCPOP00000016647 | ENSCPOP00000006985 | Chromodomain helicase DNA binding protein 3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.979 |
CHD3 | HDAC2 | ENSCPOP00000016647 | ENSCPOP00000012920 | Chromodomain helicase DNA binding protein 3. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.976 |
CHD3 | MBD2 | ENSCPOP00000016647 | ENSCPOP00000006158 | Chromodomain helicase DNA binding protein 3. | Methyl-CpG binding domain protein 2. | 0.841 |
CHD3 | MBD3 | ENSCPOP00000016647 | ENSCPOP00000018617 | Chromodomain helicase DNA binding protein 3. | Methyl-CpG binding domain protein 3. | 0.893 |
CHD3 | MTA1 | ENSCPOP00000016647 | ENSCPOP00000014361 | Chromodomain helicase DNA binding protein 3. | Metastasis associated 1. | 0.967 |
CHD3 | MTA3 | ENSCPOP00000016647 | ENSCPOP00000004819 | Chromodomain helicase DNA binding protein 3. | Metastasis associated 1 family member 3. | 0.954 |
CHD3 | RBBP7 | ENSCPOP00000016647 | ENSCPOP00000026092 | Chromodomain helicase DNA binding protein 3. | RB binding protein 7, chromatin remodeling factor. | 0.928 |
Chd4 | CHD3 | ENSCPOP00000007645 | ENSCPOP00000016647 | Uncharacterized protein. | Chromodomain helicase DNA binding protein 3. | 0.951 |
Chd4 | GATAD2A | ENSCPOP00000007645 | ENSCPOP00000029598 | Uncharacterized protein. | GATA zinc finger domain containing 2A. | 0.982 |
Chd4 | GATAD2B | ENSCPOP00000007645 | ENSCPOP00000009273 | Uncharacterized protein. | GATA zinc finger domain containing 2B. | 0.967 |
Chd4 | HDAC1 | ENSCPOP00000007645 | ENSCPOP00000006985 | Uncharacterized protein. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.997 |
Chd4 | HDAC2 | ENSCPOP00000007645 | ENSCPOP00000012920 | Uncharacterized protein. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.996 |
Chd4 | MBD2 | ENSCPOP00000007645 | ENSCPOP00000006158 | Uncharacterized protein. | Methyl-CpG binding domain protein 2. | 0.862 |
Chd4 | MBD3 | ENSCPOP00000007645 | ENSCPOP00000018617 | Uncharacterized protein. | Methyl-CpG binding domain protein 3. | 0.908 |
Chd4 | MTA1 | ENSCPOP00000007645 | ENSCPOP00000014361 | Uncharacterized protein. | Metastasis associated 1. | 0.974 |
Chd4 | MTA3 | ENSCPOP00000007645 | ENSCPOP00000004819 | Uncharacterized protein. | Metastasis associated 1 family member 3. | 0.967 |
Chd4 | RBBP7 | ENSCPOP00000007645 | ENSCPOP00000026092 | Uncharacterized protein. | RB binding protein 7, chromatin remodeling factor. | 0.932 |
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