STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD3-TMEFF1MSANTD3-TMEFF1 readthrough. (454 aa)    
Predicted Functional Partners:
Gdf1
TGF_BETA_2 domain-containing protein.
    
 0.603
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.587
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.538
ZDHHC8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.503
H0UXD4_CAVPO
TGF_BETA_2 domain-containing protein.
    
 0.483
Gdf3
TGF_BETA_2 domain-containing protein.
    
 0.483
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.461
GDF15
Growth differentiation factor 15.
    
 0.460
TDGF1
Teratocarcinoma-derived growth factor 1.
      
 0.457
Lefty2
TGF_BETA_2 domain-containing protein.
    
 0.448
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.