STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSX2GS homeobox 2. (293 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 0.638
SP8
Sp8 transcription factor.
  
 
 
 0.616
PBX2
PBX homeobox 2.
    
 0.592
PBX3
PBX homeobox 3.
    
 0.592
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 
 0.559
TSHZ1
Teashirt zinc finger homeobox 1.
    
 
 0.521
LHX6
LIM homeobox 6.
    
 
 0.467
EMX1
Empty spiracles homeobox 1.
    
 
0.449
SP9
Sp9 transcription factor.
    
 
 0.445
HES6
Hes family bHLH transcription factor 6.
    
 
 0.431
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.