STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC3Polyhomeotic homolog 3. (984 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.950
CBX4
Chromobox 4.
    
 0.924
RING1
Ring finger protein 1.
    
 0.911
RNF2
Ring finger protein 2.
    
 0.906
PCGF2
Polycomb group ring finger 2.
    
 0.905
CBX6
Chromobox 6.
    
 0.890
ENSCPOP00000021738
RING-type domain-containing protein.
    
 0.887
PHC1
Polyhomeotic homolog 1.
    
0.847
CBX7
Chromobox 7.
    
 0.844
CBX2
Chromobox 2.
    
 0.841
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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