STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein. (2132 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
    
 0.871
CEP128
Centrosomal protein 128.
    
 0.839
WASL
WASP like actin nucleation promoting factor.
   
 0.830
WAS
WASP actin nucleation promoting factor.
   
 0.830
PCNT
Pericentrin.
    
 
 0.827
CEP164
Centrosomal protein 164.
    
 0.790
CEP83
Centrosomal protein 83.
    
 0.779
CNTRL
Centriolin.
   
 0.770
CCDC120
Coiled-coil domain containing 120.
    
 0.756
CIB3
Calcium and integrin binding family member 3.
    
 
 0.726
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.