STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPEF1Serine/threonine-protein phosphatase with EF-hands. (647 aa)    
Predicted Functional Partners:
PPP4R2
Protein phosphatase 4 regulatory subunit 2.
    
 0.853
Igbp1
Uncharacterized protein.
    
 0.822
WDR82
WD repeat domain 82.
    
 0.796
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.786
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.786
ANAPC1
Anaphase promoting complex subunit 1.
    
 0.780
RHO
Rhodopsin.
   
 0.761
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.752
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.752
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.752
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.