STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY3RUN and FYVE domain containing 3. (628 aa)    
Predicted Functional Partners:
WDFY4
WDFY family member 4.
   
 
 0.801
UVRAG
UV radiation resistance associated.
    
 0.783
SHTN1
Shootin 1.
      
 0.569
ZC2HC1A
Zinc finger C2HC-type containing 1A.
      
 0.563
RUFY1
RUN and FYVE domain containing 1.
  
 
  
0.548
RAB4A
RAB4A, member RAS oncogene family.
    
  0.497
Rab4b
Uncharacterized protein.
    
  0.497
ITSN1
Intersectin 1.
    
   0.489
ITSN2
Intersectin 2.
    
   0.489
RUFY2
RUN and FYVE domain containing 2.
  
 
  
0.483
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.