STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC15Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (337 aa)    
Predicted Functional Partners:
CKAP4
Cytoskeleton associated protein 4.
     
 0.660
SKA1
Spindle and kinetochore associated complex subunit 1.
   
 
 0.608
SKA2
Spindle and kinetochore associated complex subunit 2.
   
 
 0.599
H0VGS2_CAVPO
Uncharacterized protein.
    
 
 0.556
Clspn
Uncharacterized protein.
   
 
 0.556
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
 
 0.556
LOC100717396
Uncharacterized protein.
   
 
 0.556
TIMELESS
Timeless circadian regulator.
    
 
 0.555
TIPIN
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
 
 0.552
RPA3
Replication protein A3.
   
   0.545
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.