STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXL4Lysyl oxidase like 4. (755 aa)    
Predicted Functional Partners:
ENSCPOP00000030496
Uncharacterized protein.
    
 0.713
LOXL3
Lysyl oxidase like 3.
  
 
 
0.695
LOXL2
Lysyl oxidase like 2.
  
 
 
0.666
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.603
Ddx43
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.591
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.591
Lox
Uncharacterized protein.
  
 
 
0.584
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.582
Arid4a
Tudor domain-containing protein.
    
 0.573
ARID4B
AT-rich interaction domain 4B.
    
 0.573
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.