STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB1DNA-binding protein SATB. (764 aa)    
Predicted Functional Partners:
UBL5
Ubiquitin like 5.
    
 0.839
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.739
ATF4
Activating transcription factor 4.
    
 0.734
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.699
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.684
SUMO1
Small ubiquitin-related modifier.
    
 0.669
ATF5
Activating transcription factor 5.
    
 0.639
Casp3
CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.
    
 0.615
SUMO3
Small ubiquitin-related modifier.
    
 0.598
ENSCPOP00000024881
Rad60-SLD domain-containing protein.
    
 0.598
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.