STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR6Myotubularin related protein 6. (620 aa)    
Predicted Functional Partners:
MTMR9
Myotubularin related protein 9.
  
0.979
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.861
MTMR7
Myotubularin related protein 7.
  
 
 
0.849
ENSCPOP00000031025
SAC domain-containing protein.
   
 
 0.847
SACM1L
SAC1 like phosphatidylinositide phosphatase.
     
 0.846
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.843
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.808
PLCD3
Phosphoinositide phospholipase C.
     
 0.806
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
     
 0.801
H0VB67_CAVPO
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.799
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.