STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM66Tripartite motif containing 66. (1319 aa)    
Predicted Functional Partners:
H3F3B
Histone H3; Belongs to the histone H3 family.
    
   0.736
H3-3A
H3.3 histone A.
    
   0.736
LOC100714163
Histone H3; Belongs to the histone H3 family.
    
   0.588
ENSCPOP00000025402
annotation not available
    
   0.588
ENSCPOP00000025603
annotation not available
    
   0.588
LOC100730036
Histone H3.
    
   0.588
LOC100735825
Histone H3; Belongs to the histone H3 family.
    
   0.582
ENSCPOP00000024231
annotation not available
    
   0.582
ENSCPOP00000028672
annotation not available
    
   0.582
HIST3H3
Histone cluster 3 H3.
    
   0.582
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.