STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAT1LVesicle amine transport 1 like. (414 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
    
 0.919
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.838
FASN
Fatty acid synthase.
  
0.835
Adhfe1
Fe-ADH domain-containing protein.
    
 0.708
WWOX
WW domain containing oxidoreductase.
  
 0.707
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.702
DERA
Deoxyribose-phosphate aldolase.
    
 0.698
GCAT
Glycine C-acetyltransferase.
   
 0.695
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
 0.678
ATP5F1D
ATP synthase F1 subunit delta.
    
 0.677
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.