STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB2Transmembrane and ubiquitin like domain containing 2. (321 aa)    
Predicted Functional Partners:
ERLIN1
ER lipid raft associated 1.
    
 
 0.663
ERLIN2
ER lipid raft associated 2.
    
 
 0.647
TMUB1
Transmembrane and ubiquitin like domain containing 1.
  
 
 
0.612
STK3
Serine/threonine kinase 3.
    
 0.566
STK4
Serine/threonine kinase 4.
    
 0.566
C6orf120
Chromosome 6 open reading frame 120.
      
 0.509
RNF170
Ring finger protein 170.
    
 
 0.496
TMEM259
Transmembrane protein 259.
    
 
 0.491
MYL1
Myosin light chain 1.
   
  
 0.447
RNF5
Ring finger protein 5.
    
 
 0.437
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.