STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clba1Clathrin_bdg domain-containing protein. (355 aa)    
Predicted Functional Partners:
SLC44A4
Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family.
   
    0.724
SLC4A8
Anion exchange protein.
   
    0.724
CTXN1
Cortexin 1.
   
    0.724
TTC6
Tetratricopeptide repeat domain 6.
   
    0.724
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
    0.590
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
   
    0.566
SLC4A7
Anion exchange protein.
   
    0.566
SLC4A10
Anion exchange protein.
   
    0.566
SLC44A2
Choline transporter-like protein 2; Choline transporter (By similarity). Essential for hair cell survival; Belongs to the CTL (choline transporter-like) family.
   
    0.566
LRWD1
Leucine rich repeats and WD repeat domain containing 1.
      
 0.555
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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