STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB18Ankyrin repeat and SOCS box containing 18. (451 aa)    
Predicted Functional Partners:
KCNA7
Potassium voltage-gated channel subfamily A member 7; Belongs to the potassium channel family.
   
 0.745
IFT81
Intraflagellar transport 81.
    
 0.668
RFTN1
Raftlin, lipid raft linker 1.
      
 0.613
IFT88
Intraflagellar transport 88.
   
 0.612
IFT52
Intraflagellar transport 52.
    
 0.606
IFT22
Intraflagellar transport 22.
    
 0.595
COMMD8
COMM domain containing 8.
   
  0.594
LOC100721103
TPR_REGION domain-containing protein.
    
 0.593
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.591
IFT57
Intraflagellar transport 57.
    
 0.586
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.