STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC1ELKS/RAB6-interacting/CAST family member 1. (1116 aa)    
Predicted Functional Partners:
ERC2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.993
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.972
PHLDB2
Pleckstrin homology like domain family B member 2.
    
 
 0.961
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.918
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.899
Rims1
C2 domain-containing protein.
    
 
 0.892
KIAA0930
KIAA0930.
    
 
 0.882
RIMS3
Regulating synaptic membrane exocytosis 3.
    
 
 0.813
RAB6A
RAB6A, member RAS oncogene family.
    
 
 0.808
RAB6B
RAB6B, member RAS oncogene family.
    
 
 0.808
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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