STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF1PHD finger protein 1. (559 aa)    
Predicted Functional Partners:
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.983
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.974
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.958
EED
Embryonic ectoderm development.
   
 0.949
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.912
INTS1
Integrator complex subunit 1.
    
 0.899
INTS3
Integrator complex subunit 3.
    
 0.896
AEBP2
AE binding protein 2.
    
 0.881
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.873
MTF2
Metal response element binding transcription factor 2.
  
 
0.872
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.