STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0VDD3_CAVPOHomeobox domain-containing protein. (286 aa)    
Predicted Functional Partners:
Pou5f1
POU domain protein.
   
 0.974
ENSCPOP00000030467
Uncharacterized protein.
   
 0.948
Sall4
Uncharacterized protein.
   
 0.918
STAT3
Signal transducer and activator of transcription.
     
 0.900
CD44
CD44 molecule (Indian blood group).
     
 0.899
SOX3
SRY-box transcription factor 3.
    
 0.881
SALL1
Spalt like transcription factor 1.
   
 0.868
SOX15
SRY-box transcription factor 15.
    
 0.821
DROSHA
Drosha ribonuclease III.
     
 0.820
Znf281
Uncharacterized protein.
    
 0.813
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.