STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A8Solute carrier family 17 member 8. (476 aa)    
Predicted Functional Partners:
SLC32A1
Solute carrier family 32 member 1.
   
 
 0.884
SLC18A3
Solute carrier family 18 member A3.
     
 0.880
SLC18A2
Solute carrier family 18 member A2.
     
 0.820
SLC18A1
Solute carrier family 18 member A1.
     
 0.799
SLC17A6
Solute carrier family 17 member 6.
  
  
0.788
SLC17A7
Solute carrier family 17 member 7.
  
  
0.786
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.777
OTOF
Otoferlin.
     
 0.730
VAMP1
Vesicle associated membrane protein 1.
   
 
 0.689
SYT2
Synaptotagmin 2.
   
 
 0.670
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.