STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A20Solute carrier family 25 member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)    
Predicted Functional Partners:
CRAT
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.894
CPT2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.859
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.843
APH1A
Aph-1 homolog A, gamma-secretase subunit.
 
    
 0.826
HSD17B4
Uncharacterized protein.
   
  
 0.796
ACSF2
Acyl-CoA synthetase family member 2.
    
 0.793
ZGPAT
Zinc finger CCCH-type and G-patch domain containing.
 
    
 0.715
PGM2
Phosphoglucomutase 2.
    
 0.690
PGM2L1
Phosphoglucomutase 2 like 1.
    
 0.690
CPT1A
Carnitine palmitoyltransferase 1A; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.687
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.