STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrp11Uncharacterized protein. (245 aa)    
Predicted Functional Partners:
TEP1
Telomerase associated protein 1.
    
 0.652
C1QC
Complement C1q C chain.
    
  0.573
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.480
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
  0.480
TAF12
TATA-box binding protein associated factor 12.
    
 0.457
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
    
  0.456
POT1
Protection of telomeres 1.
    
  0.452
TNFAIP6
TNF alpha induced protein 6.
    
 0.445
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
  0.424
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.423
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.