STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R21Protein phosphatase 1 regulatory subunit 21. (761 aa)    
Predicted Functional Partners:
RSPH3
Radial spoke head 3.
    
   0.986
CRYZL1
Crystallin zeta like 1.
    
   0.927
H0V3U5_CAVPO
Dystrobrevin.
    
   0.913
DTNA
Dystrobrevin alpha.
    
   0.913
HMX3
H6 family homeobox 3.
    
   0.871
Aqp7
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.800
AQP3
Aquaporin 3 (Gill blood group); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.800
AQP10
Aquaporin 10; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.800
AQP9
Aquaporin 9; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.800
C12orf4
Chromosome 12 open reading frame 4.
    
 
 0.733
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.