STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H0VFC3_CAVPOUncharacterized protein. (131 aa)    
Predicted Functional Partners:
EMC6
ER membrane protein complex subunit 6.
   
 0.971
EMC3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 0.965
EMC1
ER membrane protein complex subunit 1.
    
 0.964
EMC4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 0.964
EMC2
ER membrane protein complex subunit 2.
    
 0.964
EMC7
ER membrane protein complex subunit 7.
   
 0.958
EMC10
ER membrane protein complex subunit 10.
    
 0.955
EMC8
ER membrane protein complex subunit 8.
    
 0.952
EMC9
ER membrane protein complex subunit 9.
    
 0.936
C16orf74
Chromosome 16 open reading frame 74.
    
 
 0.667
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.