STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPHKAPSPHK1 interactor, AKAP domain containing. (1700 aa)    
Predicted Functional Partners:
GALNTL5
Polypeptide N-acetylgalactosaminyltransferase like 5.
      
 0.647
SPHK1
Sphingosine kinase 1.
    
 
 0.598
C4BPB
Complement component 4 binding protein beta.
      
 0.577
PLBD1
Phospholipase B-like; Putative phospholipase.
      
 0.577
RGS12
Regulator of G protein signaling 12.
      
 0.566
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.552
FBF1
Fas binding factor 1.
      
 0.533
EVPL
Envoplakin.
      
 0.532
AKAP10
A-kinase anchoring protein 10.
      
 0.530
OSBP
Oxysterol binding protein.
   
  
 0.527
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.