Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADGRD1 | NUP188 | ENSCPOP00000010974 | ENSCPOP00000003684 | Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. | Nucleoporin 188. | 0.678 |
ADGRD1 | Nup214 | ENSCPOP00000010974 | ENSCPOP00000002829 | Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. | Uncharacterized protein. | 0.968 |
ADGRD1 | RANBP2 | ENSCPOP00000010974 | ENSCPOP00000000343 | Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. | RAN binding protein 2. | 0.999 |
ADGRD1 | RANGAP1 | ENSCPOP00000010974 | ENSCPOP00000003974 | Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. | Ran GTPase activating protein 1. | 0.999 |
ADGRD1 | SNUPN | ENSCPOP00000010974 | ENSCPOP00000030804 | Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. | Snurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family. | 0.925 |
ADGRD1 | XPO5 | ENSCPOP00000010974 | ENSCPOP00000008899 | Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. | Exportin 5. | 0.995 |
AGO2 | DGCR8 | ENSCPOP00000032420 | ENSCPOP00000028717 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | DGCR8 microprocessor complex subunit. | 0.856 |
AGO2 | DICER1 | ENSCPOP00000032420 | ENSCPOP00000003807 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | 0.995 |
AGO2 | DROSHA | ENSCPOP00000032420 | ENSCPOP00000013567 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Drosha ribonuclease III. | 0.972 |
AGO2 | RANBP2 | ENSCPOP00000032420 | ENSCPOP00000000343 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | RAN binding protein 2. | 0.659 |
AGO2 | XPO5 | ENSCPOP00000032420 | ENSCPOP00000008899 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Exportin 5. | 0.870 |
DGCR8 | AGO2 | ENSCPOP00000028717 | ENSCPOP00000032420 | DGCR8 microprocessor complex subunit. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.856 |
DGCR8 | DICER1 | ENSCPOP00000028717 | ENSCPOP00000003807 | DGCR8 microprocessor complex subunit. | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | 0.984 |
DGCR8 | DROSHA | ENSCPOP00000028717 | ENSCPOP00000013567 | DGCR8 microprocessor complex subunit. | Drosha ribonuclease III. | 0.999 |
DGCR8 | XPO5 | ENSCPOP00000028717 | ENSCPOP00000008899 | DGCR8 microprocessor complex subunit. | Exportin 5. | 0.822 |
DICER1 | AGO2 | ENSCPOP00000003807 | ENSCPOP00000032420 | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.995 |
DICER1 | DGCR8 | ENSCPOP00000003807 | ENSCPOP00000028717 | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | DGCR8 microprocessor complex subunit. | 0.984 |
DICER1 | DROSHA | ENSCPOP00000003807 | ENSCPOP00000013567 | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | Drosha ribonuclease III. | 0.793 |
DICER1 | XPO5 | ENSCPOP00000003807 | ENSCPOP00000008899 | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | Exportin 5. | 0.865 |
DROSHA | AGO2 | ENSCPOP00000013567 | ENSCPOP00000032420 | Drosha ribonuclease III. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.972 |
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